Omics Trend-comparing Interactive Data Explorer (OmicsTIDE) is an interactive visualization tool developed to address the limitations of current visualization approaches in the multi-omics field. The tool consists of an automated part that clusters omics data to determine trends and an interactive visualization. The trends are visualized as profile plots and are connected by a Sankey diagram that allows an interactive pairwise trend comparison to discover concordant and discordant trends.
OmicsTIDE demos:
Visit OmicsTIDE here: https://omicstide-tuevis.cs.uni-tuebingen.de/
Note: Mixed content needs to be enabled in the browser settings, as the PANTHER API that is used for GO enrichment does not provide the HTTPS protocol.
GitHub: https://github.com/Integrative-Transcriptomics/OmicsTIDE2.0
Cite:
Theresa A Harbig, Julian Fratte, Michael Krone, Kay Nieselt, OmicsTIDE: interactive exploration of trends in multi-omics data, Bioinformatics Advances, Volume 3, Issue 1, 2023, vbac093, https://doi.org/10.1093/bioadv/vbac093