PTMVision (Interactive Visualization of Post Translational Modifications) is an interactive web platform that allows researchers to effortlessly analyze and explore PTM data derived from various sources, including search engines such as ionbot, MSFragger, Sage, or from a plain CSV table format processed from mass spectrometry (MS) data. Understanding the intricate landscape of PTMs is crucial for unraveling the complex mechanisms underlying cellular processes and diseases: PTMVision offers a variety of tools to visualize the PTM landscape from different angles and at different levels, such as 3D structures and contact maps, Unimod classification summaries, and site specific overviews. The web server’s user-friendly interface ensures accessibility across diverse scientific backgrounds.
Visit PTMVision at https://ptmvision-tuevis.cs.uni-tuebingen.de/
GitHub: https://github.com/Integrative-Transcriptomics/PTMVision
Citation
PTMVision: An Interactive Visualization Webserver for Post-translational Modifications of Proteins
Simon Hackl, Caroline Jachmann, Mathias Witte Paz, Theresa Anisja Harbig, Lennart Martens, and Kay Nieselt Journal of Proteome Research 2025 24 (2), 919-928 DOI: 10.1021/acs.jproteome.4c00679